VAT for Limited Companies: Registration and the Flat Rate Scheme

Updated 21 October 2026 · 3 tips · LimitedCompany.Accountants, part of ACCOTAX

VAT can cost or save you thousands a year depending on how you set it up. Here are three decisions worth getting right.

We review your VAT position and tell you whether the flat rate scheme still pays.

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1. Consider registering for VAT voluntarily

You must register once VAT-able turnover for the last 12 months exceeds £90,000, or you expect to pass it in the next 30 days. Below that, registering voluntarily lets you reclaim VAT on your costs. It usually pays if your customers are VAT-registered businesses, because they can reclaim the VAT you charge. Example: a software consultancy turning over £45,000 a year registers voluntarily and reclaims £2,800 of VAT on equipment and subscriptions in year one. If you sell mainly to the public, staying unregistered may keep your prices competitive. Once registered, you must keep digital records and file under Making Tax Digital.

2. Save admin with the VAT flat rate scheme

If your taxable turnover is £150,000 or less (excluding VAT), you can join the flat rate scheme. You pay HMRC a fixed percentage of your VAT-inclusive turnover, set by your trade sector, instead of tracking VAT on every purchase. You get a 1% discount in your first year of VAT registration. You can stay in the scheme until total income including VAT passes £230,000. You still issue VAT invoices showing VAT separately.

3. Check whether you are a limited cost trader

If you spend less than 2% of VAT-inclusive turnover on "relevant goods", or more than 2% but under £1,000 a year, you are a limited cost trader and must use a flat rate of 16.5%. That equals 19.8% of your net turnover, so almost all the VAT you charge goes to HMRC. Relevant goods exclude services, capital items such as laptops, fuel (unless you are in transport), food for staff, and downloaded software. Example: a consultant billing £12,000 a quarter including VAT would pay £1,980 under the 16.5% rate. Under normal VAT accounting, with £400 of VAT on costs, they would pay £1,600. Many service companies are better off leaving the scheme.

Frequently asked questions

What is the VAT registration threshold for 2026/27?

£90,000 of taxable turnover in a rolling 12-month period.

Is the flat rate scheme worth it for consultants?

Often not: most consultants are limited cost traders paying 16.5%, which is close to handing over all the VAT they charge.

We review your VAT position and tell you whether the flat rate scheme still pays.

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Related reading

Figures apply to the 2026/27 tax year and are for general guidance only. Speak to a qualified accountant before acting.

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