E-commerce accountants

Accountant for online sellers

Accountants for UK online sellers across marketplaces and own stores. Payouts reconciled, VAT handled, fixed monthly fee, everything filed on time.

Short answer

An accountant for online sellers reconciles every channel's payouts, applies the correct VAT to each sale, keeps stock and cost of goods accurate, and files your accounts and tax returns. We do it online for a fixed monthly fee.

Written and reviewed by Waqas Sagar Member of ICAEW, Fellow of ACCA, Fellow of AAT, a double graduate and entrepreneur at heart, helping startups grow and serving thousands of businesses nationwide with an excellent team. Published by LimitedCompany.Accountants, 12 London Road, Morden, London SM4 5BQ. Reviewed 12 September 2026 against 2026/27 UK rates and current Companies House and HMRC guidance.

What this means for your company

An accountant for online sellers reconciles every channel's payouts, applies the correct VAT to each sale, keeps stock and cost of goods accurate, and files your accounts and tax returns. We do it online for a fixed monthly fee.

01

One ledger, every channel

02

The compliance calendar

03

Free basic advice, quoted technical work

Short answer

An accountant for online sellers reconciles every channel's payouts, applies the correct VAT to each sale, keeps stock and cost of goods accurate, and files your accounts and tax returns. We do it online for a fixed monthly fee.

One ledger, every channel

Whether you sell on Amazon, eBay, Etsy, Shopify, TikTok Shop or all of them, the accounts should show each channel's revenue, fees and margin separately and then total cleanly. That comparison is what tells you where to put the next thousand pounds of stock or advertising.

The compliance calendar

Quarterly VAT under Making Tax Digital, monthly payroll RTI submissions if you pay yourself, an annual confirmation statement, accounts nine months after your year end, and corporation tax payable nine months and a day after it. We run the calendar; you get reminders well before anything is due.

Free basic advice, quoted technical work

Ask us whether a cost is deductible, whether to register for VAT or how to pay yourself, and there is no charge. Anything technical, such as an overseas registration or a restructuring, is priced before we start so there are no surprise invoices.

Before you act

Rates, thresholds and deadlines quoted here reflect the current UK position and current HMRC and Companies House guidance. Check GOV.UK, or ask us, before relying on them for your own business.

Related answers

More for e-commerce accountants

Every answer in this cluster is written for UK limited company directors and reviewed against current HMRC and Companies House guidance.

Local help

Talk to a limited company accountant near you

We work with company directors across London and Surrey from our office at 12 London Road, Morden, London SM4 5BQ. Pick your area, or send the form below and we will call you back.

Frequently asked

Accountant for online sellers: questions directors ask

I sell on three platforms. Is that extra?

There is a small increment per channel because each needs reconciling, and it is in your quote up front.

Can you sort out a messy previous year?

Yes. Clean up is quoted separately from the monthly fee.

Do you work with sole traders?

Yes, though most of our online sellers trade through limited companies.

How should marketplace payouts be reconciled for accountant for online sellers?

Start with gross orders and reconcile through refunds, marketplace taxes, selling fees, advertising, fulfilment charges, reserves and currency differences to the net bank deposit. The settlement report, not the bank receipt alone, is the accounting source.

How do marketplace fees affect profit for accountant for online sellers?

Selling, payment, fulfilment and advertising fees should be separated so contribution margin is visible by channel. This helps distinguish high revenue from profitable revenue and supports better pricing, stock and advertising decisions.

What records are needed for accountant for online sellers?

Keep bank statements, sales and platform reports, purchase invoices, payroll records, VAT workings, finance agreements and Companies House correspondence. We confirm the exact list at onboarding and identify gaps before a filing deadline becomes urgent.

How much does help with accountant for online sellers cost?

The fee depends on transaction volume, record quality, VAT and payroll requirements, historic catch-up and the level of reporting needed. We agree a fixed scope and price before technical work starts, with published packages available on our fees page.

Can you take over accountant for online sellers from another accountant?

Yes. We request professional clearance, collect the prior records and authorities, check the next Companies House and HMRC deadlines, and give you one clear handover list. The process is normally completed remotely.

Can accountant for online sellers be handled online?

Yes. We work through secure cloud records, scheduled reviews and digital approvals, while keeping a named team available by phone, video call and email. Clients can also visit our Morden office by appointment.

Which accounting software works best for accountant for online sellers?

We regularly work with Xero, QuickBooks, FreeAgent, Sage and connected sales or expense apps. The right setup depends on transaction volume, integrations and the reports you need, not simply the software brand.

Google reviews

What Our Clients Say

Rated 4.9 out of 5From 302 Google reviews
I've been working with Accotax since January 2024, and their support has grown alongside my business needs. My personal allocated manager, Umer, provides tailored services for both of my companies, adapting as I expand and ensuring everything runs smoothly. They are responsive, knowledgeable, and always clear in their communication. Their help with accounts, VAT, payrolls, pensions and compliance gives me real confidence and peace of mind.
Зайтуна «Анонимная татарка» Manning · Two limited companies, VAT, payroll & pensions
We worked with a few different accountants before finally settling with Accotax, and we're really glad we did. They take the time to understand how our business works and what our needs are. Anum, who looks after our account on a day-to-day basis, including reconciling invoices and preparing the annual accounts, is amazing, professional, efficient, and follows the processes we have put in place together. Accotax has made our accounting experience much smoother and easier. We see them as a long-term partner as our business continues to grow. I would 100% recommend them.
Mael Leboucher · Year end accounts & bookkeeping
Accotax have been our accountants for many years now. We maintained them because of their professionalism. In the last couple of years I have been working with Imran, who has been very professional and helpful in guiding us through the whole process, explaining and clarifying every aspect of it. Very prompt in responding to questions and patient with us even when we seem to be slow.
Mansur Liman · Long-standing company client
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Included approach

Organised, explained, on schedule.

Clear scopeDeadline visibilityHuman support

Key tax terms explained

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Share your next deadline, accounting problem or growth question. We will reply with a clear next step and quote any technical work before it begins.

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Pick a time that suits you and a qualified accountant will call you about your company, deadlines and fees.

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Appointments run Monday to Friday, 9:00am to 5:30pm. Your confirmation is emailed straight away.

Four London offices

Meet us in Morden, Croydon, Chelsea or Mitcham

Work with us entirely online, or sit down with your accountant at whichever office suits you. Open Monday to Friday, 9:00am to 5:30pm. Office visits are by appointment only, so please book before coming in.

Morden, Surrey12 London Road, Morden, SM4 5BQHead office, two minutes from Morden Underground station.DirectionsRead ACCOTAX Google reviews
Croydon73 Park Lane, Croydon, CR0 1JGCentral Croydon, minutes from East Croydon station.DirectionsRead Croydon Google reviews
ChelseaM-112, 65-69 Lots Road, SW10 0RNWest London base for Chelsea, Fulham and Kensington clients.DirectionsRead ACCOTAX Google reviews
Mitcham141 Morden Road, CR4 4DGServing Mitcham, Tooting and the CR4 postcodes.DirectionsRead Mitcham Google reviews

Free, no obligation

Book a call

Pick a time that suits you and a qualified accountant will call you about your company, deadlines and fees.

Appointments run monday to friday, 9:00am to 5:30pm. Your confirmation is emailed straight away.

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